Unit 3 Communicable Diseases

View Unit 3 Flash Cards.docx from HIT 260 at Indian Hills Community College. Infectious and Parasitic Diseases HIV Infection Chapter 1 U3.1 Sepsis U3.5 Infectious agents as cause of. Communicable diseases are those diseases that may be transmitted from person to person, food, water and/or animals and are the most common cause of school absenteeism. Prevention and Control of the Spread of Communicable Diseases. The cooperation of school personnel, health department, physicians, parents and students is essential. Level 6 Unit 3 Part 2 Listening: Infectious Diseases Despite advances in technology, one of the biggest threats to human survival comes from primitive life forms. Infectious diseases are caused by micro-organisms, such as bacteria, viruses and parasites(寄生虫).

We live in a world shaped by infectious disease. What does that mean? Over the course of five units, let’s explore the history and science of diseases like smallpox and the common cold to better understand how our own bodies work and what we can do to avoid dying of future plagues.

Unit 1

Why should we care about infectious disease?

Lesson 1: What is an infectious disease and why do we care?
Lesson 2: How infectious disease has molded history – including ours
Lesson 3: Bacterial structures
Lesson 4: Viral sizes and structures
Lesson 5: So why aren’t we always sick? Our body’s defenses

Bacterial Pathogen Pronunciation Station
Visit the Bacterial Pathogen Pronunciation Station site to listen to the pronunciations of most, if not all, of the microbial names you will encounter throughout ID.

Unit 2

What does it mean to have an infectious disease?

Lesson 1: Infectious Disease Detectives – Typhoid Mary
Lesson 2: What are the patterns of infectious disease?
Lesson 3: How do infectious diseases spread?
Lesson 4: How can we prove infection causes disease?
Lesson 5: Do bacteria cause stomach ulcers? Applying Koch’s postulates

Unit 3

When does a microbe become pathogenic?

Lesson 1: The zoo in you – our microbial ecosystem and Ebola
Lesson 2: Reservoirs and vectors – Lyme disease and Malaria
Lesson 3: Invasion of the body snatchers – Fighting back after infection

Unit 4

How do pathogens make us sick?

Lesson 1: Why we feel sick – how pathogens cause direct and indirect damage
Lesson 2: Toxins – Botox, tetanus, hamburger disease, and MRSA
Lesson 3: How do bacteria adapt to become pathogens? – The adaptation auction
Lesson 4: How viruses make us sick – Viral replication
Lesson 5: How do viruses adapt? – Antigenic shift and drift and the flu pandemic
Lesson 6: Designing an antiviral drug – The challenge of HIV

Unit 5

How do we get better?

Lesson 1: Our body’s barriers – the innate immune system
Lesson 2: Evolving pathogens – the adaptive immune system
Lesson 3: Evolving pathogens – our body’s responses – B and T cells
Lesson 4: Our body’s responses – putting it all together!
Lesson 5: What makes a good vaccine?

The Great Debate – Are vaccines worth the risk?

Recommended resources:

  • World Health Organization (WHO): Measles Fact Sheet
  • Centers for Disease Control and Prevention (CDC): Possible Side-effects from Vaccines
  • PATH Vaccine Resource Library: How Vaccines Work
  • New Scientist: Vaccine Scandal Revives Cancer Fears
  • New Scientist: Vaccination risks are ‘too small to count’
  • New Scientist: Vaccination campaigns launched in quake zone
  • New Scientist: Misleading vaccination statistics put lives at risk
  • The Boston Globe: Measles case leads to mass vaccinations

Final Project: Make a public health brochure about an infectious disease of your choice.

Recommended resources:

  • World Health Organization, especially the Global Alert and Response Disease Outbreak News subsite
  • MedlinePlus (National Library of Medicine)
  • American Society for Microbiology, especially MicrobeWorld
  • Kenyon College’s MicrobeWiki
  • Program for Monitoring Emerging Diseases, aka ProMED-mail (International Society for Infectious Diseases)

Lab Case Study

The Tragic Case of Stan: Extended Reading and Lab Videos

If you are having trouble displaying the videos, try resizing your browser window.

The Lab Case Study looks at the clinical side of pathogen isolation, treatment and the challenges that may arise in the process. This extended reading provides more detail about the growing problem of antibiotic resistance.

Lab Case Study – Extended Reading : Antibiotic Resistance

The Basics of Lab Safety

Isolating Bacterial Colonies – Streaking

Antibiotic Susceptibility Testing

Q3 Communicable Diseases Report 2016

Unit 3 Communicable Diseases Disease

This is the Communicable Diseases Quarterly report from Public Health Services for the period 1 July to 30 September 2016.

It includes commentary on selected diseases and a table of all diseases reported for this period.

Key Points

  • Increased notifications of HIV infection
  • Dengue case notifications continue
  • Cases of invasive meningococcal disease
  • Shigellosis cases elevated

Human Immunodeficiency Virus (HIV)

Seven cases of HIV infection were notified during the third quarter, which was greater than the five year mean for the same period (three cases). There was no evidence to indicate that any of the cases were recently acquired infections.

In Tasmania, a collaborative multimedia campaign encouraging testing was rolled out. Compared to the same period last year, HIV testing has increased by 10-15 per cent at Sexual Health Services and a private pathology laboratory.

Dengue and Chikungunya

Ten cases of dengue were reported in the third quarter which was greater than the five year mean of three cases, for the same period. All cases of illness were acquired overseas, with travel to various regions which included Indonesia and Thailand. Increased notification of overseas acquired dengue cases was also noted in the previous quarter (14 cases).

There was one case of chikungunya notified this quarter, which was the second case reported this year. The most recent case was acquired in India; the other case reported earlier this year was acquired in Cuba.

Dengue and Chikungunya are mosquito-borne diseases. Tasmania does not have the Aedes mosquitos that can spread these viruses.

Dengue is endemic in many tropical and subtropical areas. Chikungunya is endemic to most of Africa and has now become established in the India Ocean region, South East Asia and some parts of the Western Pacific, the Caribbean and emergent in other areas such as Italy.

There are no specific treatments or vaccines. The best way to protect against diseases such as dengue fever, zika and chikungunya is to avoid mosquito bites.

Meningococcal Disease (invasive)

Two cases of invasive meningococcal disease (IMD) were reported this quarter. While the number of cases was less than five year mean (three cases), the type of Neisseria meningitidis associated with both cases is of note. The cases were not related to each other, but were typed as Type W strains. Nationally, Men W has emerged as a significant cause of IMD since 2015.

The cases were atypical as they presented with fever and joint inflammation, with the Neisseria meningitidis bacteria being isolated in specimens of joint fluid in both cases. There was an extensive public health response to both cases, with the organisation of clearance antibiotics and vaccination for household-like contacts.

The Public Health Services website contains information on meningococcal disease

Rubella

One case of rubella was diagnosed this quarter in a female aged in her 50’s. Rubella is rarely reported in Tasmania as there are high levels of immunisation in Australia.

In most cases rubella is a mild disease; however infection in early pregnancy can cause serious birth defects or miscarriage. Rubella can be difficult to diagnose because there are many other viruses that cause similar illnesses with a fever and a rash. A blood test will confirm if someone has rubella.

The Public Health website contains information on rubella and the current immunisation schedules

Unit 3 Communicable Diseases

Shigellosis

There were five cases of shigellosis diagnosed this quarter; this was elevated compared to the five year mean for the same period (two cases). The majority of cases reported overseas travel in their acquisition period.

A shigellosis case in an elderly male with no recent overseas travel appears to be locally acquired. The source of infection was not able to be definitively identified.

Institutional Outbreaks

During this quarter there were four non-foodborne institutional outbreaks of gastroenteritis reported to Communicable Diseases Prevention Unit (CDPU). This number was less than the average number of outbreaks reported during the second quarter of the previous five years (12 outbreaks). All four outbreaks were classified as person to person transmission.

Two outbreaks occurred in aged care facilities, one outbreak occurred in a childcare centre and one outbreak occurred in a hospital. The facilities were located across the state.

Norovirus was the infectious agent in two institutional outbreaks. The infectious agent in the remaining two outbreaks was unable to be determined.

Gastroenteritis in a residential, educational or childcare institution (similar gastrointestinal illness in two or more people within three days) is notifiable in Tasmania and should be reported to the CDPU via the Public Health Hotline - Tasmania 1800 671 738.

This report is produced by the Communicable Diseases Prevention Unit of Public Health Services. For any queries and feedback please make contact via cdpu.surveillance@dhhs.tas.gov.au

Information about influenza activity in Tasmania is available in the fluTAS Report. Information about notifiable diseases in Tasmania is available from the CDPU website.

Most Common Communicable Disease

National communicable disease information and reports are available from the Department of Health and summary national data is available from the National Notifiable Disease Surveillance System

Table: Notifiable diseases reported in Tasmania during the third quarter of 2016 (July-September) with comparison to previous quarters by derived diagnosis date.

Q3 2016

Q2 2016

Q3 2015

Q3 5y Mean*

Ratio ^

2016 YTD#

Barmah Forest Virus

0

0

1

0

0

0

Campylobacteriosis

267

208

244

192

1.39

836

Chikungunya

¨

1

0

0

0

0

2

Chlamydia

Ø

254

446

395

420

0.6

1182

CJD

0

0

0

0

0

0

Cryptosporidiosis

12

5

9

14

0.86

24

Dengue

¨

10

14

3

3

3.33

28

Flavivirus infection (unspecified)

0

1

0

0

0

1

Gonococcal Infection

18

23

12

11

1.64

56

Haemolytic Uraemic Syndrome

0

1

0

0

0

1

Haemophilus Influenzae Type B Infection (invasive)

0

0

0

0

0

0

Hepatitis A

0

0

0

1

0

0

Hepatitis B-Newly Acquired

0

0

0

2

0

1

Hepatitis B-Unspecified

15

12

13

12

1.25

33

Hepatitis C-Newly Acquired

3

4

8

6

0.5

15

Hepatitis C-Unspecified

65

53

64

55

1.18

168

Hepatitis E

0

0

0

0

0

0

HIV infection - newly acquired

0

1

1

1

0

3

HIV infection - unspecified

¨

7

1

3

3

2.33

10

Hydatids

0

0

0

0

0

0

Influenza

738

73

1152

606

1.22

860

Legionellosis

0

5

2

3

0

7

Leprosy

0

0

0

0

0

1

Leptospirosis

0

0

0

0

0

0

Listeriosis

0

1

0

1

0

1

Lymphogranuloma venereum (LGV)

0

0

0

0

0

0

Malaria

0

0

0

2

0

1

Measles

0

3

0

1

0

3

Meningococcal Disease (invasive)

2

0

1

3

0.67

4

Mumps

1

1

0

1

1

4

Paratyphoid

0

1

0

0

0

2

Pertussis

11

9

13

89

0.12

27

Pneumococcal Disease (invasive)

12

17

16

15

0.8

35

Psittacosis(Ornithosis)

0

0

0

0

0

0

Rickettsial Infection

0

0

0

0

0

0

Ross River Virus

0

2

0

0

0

5

Rotavirus

2

9

6

14

0.14

28

Rubella

¨

1

0

0

0

0

1

Salmonellosis

40

75

34

35

1.14

226

Shiga toxin producing E.coli

0

0

0

0

0

0

Shigellosis

¨

5

2

3

2

2.5

8

Syphilis-infectious

0

1

4

4

0

2

Syphilis-unknown duration

2

5

2

3

0.67

7

Tuberculosis

2

1

2

3

0.67

5

Tularaemia

0

0

0

0

0

0

Typhoid

0

0

1

0

0

1

Typhus

0

0

0

0

0

0

Varicella zoster (chicken pox)

14

22

20

12

1.17

56

Varicella zoster (shingles)

72

78

58

61

1.18

221

Varicella zoster (unspecified)

34

36

36

25

1.36

109

Vibrio Infection

0

0

0

0

0

8

Yersinia

3

2

8

2

1.5

7

*This figure is based on the five-year quarterly mean, calculated for this report quarter, for the years 2011-2015.

^The ratio is the number of cases notified in the quarter compared to the five-year mean for that quarter.

#Year to date count at the end of the reporting quarter.

¨Disease case numbers are beyond two standard deviations of the historical five-year mean for this period of time.

Ø Chlamydia notification data is current up to 25 August 2016. This number does not represent all notifications that have been received this quarter.

Data are extracted based on the available date closest to the disease onset date. Data are subject to change over time due to ongoing data review processes.

As well as true changes in disease incidence, changes in surveillance practice, diagnostic techniques and reporting may also contribute to increases or decreases in notifications received over time.